MolDS

  • Level of openness 3 ★★★
  • Document quality 1 ★☆☆

An application for semi-empirical quantum chemistry calculation. Special emphasis is placed on molecular dynamics simulations, and is able to run efficiently on large-scale cluster computer systems using OpenMP/MPI hybrid parallelism. The code is still under development, but the source code is distributed freely under the GPL license.

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Molekel

  • Level of openness 3 ★★★
  • Document quality 2 ★★☆

An open-source application for molecular modeling and visualization. This application supports data formats of Gaussian, GAMESS, ADF, and Molden, and has various options for drawing such as orbital, electron density, solvent accessible surface, van der Waals radii, and so on. It implements high-speed and high-quality rendering technology, and runs on Windows, Mac, and Linux.

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Molpro

  • Level of openness 0 ☆☆☆
  • Document quality 2 ★★☆

Payware for first-principles quantum chemical calculation. This application performs molecular orbital calculation based on Hartree-Fock approximation, density functional method, and post-HF methods such as MP, f12, multi-configuration SCF, and coupled cluster method. It also implements calculation by path-integral instanton, quantum Monte Carlo, and density-matrix renormalization group method.

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MOPAC

  • Level of openness 3 ★★★
  • Document quality 2 ★★☆

An open-source application for semi-empirical quantum chemical calculation based on NDDO (neglect of diatomic differential overlap) approximation. This program calculates, for a given molecule or a crystal, molecular orbits and atomic forces, as well as vibration spectra, thermal quantities (heat of formation etc.), isotopic exchange effect, force constant, and so on. It can also treat radicals and ions.

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mptensor

  • Level of openness 3 ★★★
  • Document quality 2 ★★☆

Parallel C++ Library for tensor network methods. This library provides common operations, including tensor contraction and singular value decomposition and supports a similar interface as Numpy and Scipy in Python.

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MSC Nastran

  • Level of openness 0 ☆☆☆
  • Document quality 3 ★★★

An application for multi-purpose structure analysis based on a finite-element method. This application can analyze static properties, dynamic response, and vibration response. It also can calculate nonlinear dynamics of thermal transport and stress/strain of structures. It implements various numerical algorithms and user can choose an appropriate algorithm to solve the problems. It supports parallel processing and has user customization option by its original program language.

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MultiPie

  • Level of openness 3 ★★★
  • Document quality 2 ★★☆

A Python library for manipulating  symmetry operations and automatically generating symmetry-adapted multipole basis (SAMB) based on crystallographic point and space groups. By using QtDraw, users can also visualize the output of this library.

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mumax3

  • Level of openness 3 ★★★
  • Document quality 3 ★★★

An open-source application for micromagnetic simulation optimized for general-purpose computing on GPU. This application can calculate spatial distribution of magnetization with speed of more than 100 times compared with CPU calculation. This application can also treat the RKKY interaction, effect of spin injection, and Voronoi diagrams. It supports remote computing using its web-GUI system.

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mVMC

  • Level of openness 3 ★★★
  • Document quality 2 ★★☆

A low-energy solver for a wide ranger of quantum lattice models (multi-orbital Hubbard model, Heisenberg model, Kondo-lattice model) by using variational Monte Carlo method. User can obtain high-accuracy wave functions for ground states of above models. Users flexibly choose the correlation factors in wavefunctions such as Gutzwiller, Jastrow, and doublon-holon binding factors and optimize more the ten thousand variational parameters. It is also possible to obtain the low-energy excited states by specifying the quantum number using the quantum number projection.

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myPresto

  • Level of openness 3 ★★★
  • Document quality 3 ★★★

Commercially-available free software for Computer-Aided Drug Development. It includes programs for compound database, protein-compound docking, structure-based drug screening, ligand-based drug screening, protein-ligand binding site prediction, molecular editor, physical property prediction, synthetic accessibility prediction, thermodynamic calculation including multi-canonical dynamics, and molecular dynamics simulations with and without acceleration using GPUs and MPI parallelization.

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