scikit-learn

  • Level of openness 3 ★★★
  • Document quality 3 ★★★

An open-source library for data mining and data analysis. This package implements various methods of machine learning such as supervised learning (data classification, data regression, etc.), unsupervised learning (data clustering, etc.), and data pre-processing. This package is implemented on Python numerical libraries, NumPy and Scipy, and supports parallel computation.

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BoltzTraP2

  • Level of openness 3 ★★★
  • Document quality 3 ★★★

An application for calculating transport coefficients based on the Boltzman equation. Within the relaxation time approximation, transport coefficients such as the Hall coefficient and the Seebeck coefficient can be evaluated from the output of the first principles calculation applications (Wien2k, ABINIT, SIESTA, quantum ESPRESSO, VASP). If users can measure relaxation time experimentally, electric conductivity can also be evaluated.

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OpenDX

  • Level of openness 3 ★★★
  • Document quality 3 ★★★

Open source software package to visualize scientific/engineering data. This is provided as a GUI application based on X window system to move the camera, modify parameters, and play animation. This supports several data formats; CDF, NetCDF, and so on.

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Atomic Simulation Environment (ASE)

  • Level of openness 3 ★★★
  • Document quality 3 ★★★

A set of python modules for modeling atomic structures, running simulations, and visualizing results. These modules provide interfaces for various application of first-principles calculation, classical molecular dynamics, and quantum chemical calculation through GUI, command line, or python scripts. The source code is available under the LGPL.

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Gaussian

  • Level of openness 0 ☆☆☆
  • Document quality 3 ★★★

Standard payware for ab-initio quantum chemical calculation. This package performs electronic-state simulation of molecules by various quantum chemical theory such as Hartree-Fock theory, density functional theory, configuration interaction theory, etc. This package can perform structure optimization, calculation of transition states, evaluation of optical responses with high speed, and have many users in the world.

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LAMMPS

  • Level of openness 3 ★★★
  • Document quality 3 ★★★

A general-purpose open-source application for classical molecular dynamics simulation, distributed under the GPL license. This package can perform molecular dynamics calculation of various systems such as soft matters, solids, and mesoscopic systems. It can be used as a simulator of classical dynamics of realistic atoms as well as general model particles. It supports parallel computing through spatial divisions. Its codes are designed so that their modification and extension are easy.

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QUANTUM ESPRESSO

  • Level of openness 3 ★★★
  • Document quality 3 ★★★

Open-source program for first-principles calculation based on pseudo-potential and plane-wave basis. This package performs electronic-state calculation with high accuracy based on density functional theory. In addition to basic-set programs, many core-packages and plugins are included. This package can be utilized for academic research and industrial development, and also supports parallel computing.

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Molcas

  • Level of openness 0 ☆☆☆
  • Document quality 3 ★★★

An application for ab initio quantum chemical calculation. This application can calculate ground states and excited states of molecules by the SCF/DFT, the CASSCF/RASSCF, and the CASPT2/RASPT2 method. It is architected especially for obtaining potential energy surfaces of excited states, and maintains high-speed, high-accuracy, and robust open codes.

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ONETEP

  • Level of openness 0 ☆☆☆
  • Document quality 3 ★★★

An application for first-principles calculation based on the order-N method. This application can perform electronic-state calculation and band calculation for various physical systems. It supports the DFT+U method, the time-dependent DFT method, molecular dynamics, etc., and can also treat van der Waals forces and phonons. By using support applications, generation of input files, transformation between different file formats, and analysis of numerical results can be performed.

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Zindaiji3

  • Level of openness 3 ★★★
  • Document quality 3 ★★★

An application for visualization of large-scale many-particle simulation. This application can visualize information on a large number of particles treated in calculation of gravitational many-body problems, and provides many features for creating animations. It implements high-speed visualization with OpenGL, and supports graphical user interface (GUI) for operations.

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